Search results for year 2020

Result count: 56

Published:

Category: "Refereed journal"

Menezes, R., Foito, A., Jardim, C., Costa, I., Garcia, G., Rosado-Ramos, R., Freitag, S., Alexander, C.J., Outeiro, T.F., Stewart, D. and Santos, CN. (2020). Bioprospection of natural sources of polyphenols with therapeutic potential for redox-related diseases. Antioxidants 9, 789. MDPI (Multidisciplinary Digital Publishing Institute).

Citores, L., Ibaibarriaga, L., Lee, D.J., Brewer, M.J., Santos, M. and Chust, G. (2020). Modelling species presence-absence in the ecological niche theory framework using shape-constrained generalized additive models. Ecological Modelling 418, 108926.

Carvalho, A., Ribeiro, H., Newman, G., Brewer, M.J., Guedes, A., Abreu, I., Noronha, F. and Dawson, L.A. (2020). Geochemical analysis of sediment samples for forensic purposes: characterisation of two river beaches from the Douro River, Portugal. Australian Journal of Forensic Science 52, 222-234.

Weise, D.R., Jung, H., Palarea Albaladejo, J. and Cocker, D.R. (2020). Compositional data analysis of smoke emissions from debris piles with low-density polyethylene. Journal of the Air & Waste Management Association 70(8), 834-845.

Rasmussen, C.L., Palarea Albaladejo, J., Johansson, M.S., Crowley, P., Stevens, M.L., Gupta, N., Karstad, K. and Holtermann, A. (2020). Zero problems with compositional data of physical behaviors: a comparison of three zero replacement methods. International Journal of Behavioral Nutrition and Physical Activity 17(1), 126. BMC.

Bica, R., Palarea Albaladejo, J., Kew, W., Uhrin, D., Pacheco, D., McRae, A. and Dewhurst, R.J. (2020). Nuclear magnetic resonance to detect rumen metabolites associated with enteric methane emissions from beef cattle. Scientific Reports 10(1), 5578. Nature Publishing Group.

Wattegedera, S., Livingstone, M., Maley, S.M., Rocchi, M.S., Lee, S., Pang, Y.P., Wheelhouse, N.M., Aitchison, K., Palarea Albaladejo, J., Buxton, D.A., Longbottom, D. and Entrican, G. (2020). Defining immune correlates during latent and active chlamydial infection in sheep. Veterinary Research 51(1), 75. BMC.

Dumuid, D., Pedišić, Ž., Palarea Albaladejo, J., Martin-Fernandez, J.A., Hron, K. and Olds, T. (2020). Compositional data analysis in time-use epidemiology: what, why, how. International Journal of Environmental Research and Public Health 17, 2220. MDPI (Multidisciplinary Digital Publishing Institute).

Cayuela-Sánchez, J.A., Palarea Albaladejo, J., Zira, T.P. and Moriana-Correro, E. (2020). Compositional method for nutritional labeling of industrial pastries and biscuits based on Vis/NIR spectroscopy. Journal of Food Composition and Analysis 92. Elsevier.

Weise, D.R., Palarea Albaladejo, J., Johnson, T.J. and Jung, H. (2020). Analyzing Wildland Fire Smoke Emissions Data Using Compositional Data Techniques. Journal of Geophysical Research - Atmospheres 125(6), e2019JD032128. Wiley.

Butler, B., Palarea Albaladejo, J., Shepherd, K.D., Nyambura, K.M., Towett, E.K., Sila, A. and Hillier, S. (2020). Mineral-nutrient relationships in African soils assessed using cluster analysis of X-ray powder diffraction patterns and compositional methods. Geoderma 375, 114474. Elsevier.

Del Pozo Cruz, B., McGregor, D.E., Del Pozo-Cruz, J., Buman, M., Palarea Albaladejo, J., Alfonso-Rosa, R.M. and Chastin, S.F.M. (2020). Integrating Sleep, Physical Activity, and Diet Quality to Estimate All-Cause Mortality Risk: A Combined Compositional Clustering and Survival Analysis of the National Health and Nutrition Examination Survey 2005-2006 Cycle. American Journal of Epidemiology 189(10), 1057-1064. Oxford Academic.

Comas-Cufi, M., Martin-Fernandez, J.A., Mateu-Figueras, G. and Palarea Albaladejo, J. (2020). Modelling count data using the logratio-normal-multinomial distribution. Statistics and Operations Research Transactions 44(1), 99-126. Statistical Institute of Catalonia, Barcelona, Spain.

Nunn, F., Bartley, K., Palarea Albaladejo, J. and Nisbet, A.J. (2020). The evaluation of feeding, mortality and oviposition of poultry red mite (Dermanyssus gallinae) on aging hens using a high welfare on-hen feeding device [version 1; peer review: 2 approved]. F1000Research 9, 1266. F1000Research.

Caspe, S.G., Livingstone, M., Frew, D., Aitchison, K., Wattegedera, S., Entrican, G., Palarea Albaladejo, J., McNeilly, T., Milne, E., Sargison, N.D., Chianini, F. and Longbottom, D. (2020). The 1B vaccine strain of Chlamydia abortus produces placental pathology indistinguishable from a wild type infection. PLoS ONE 15(11), e0242526. PLoS.

Hanks, E., Todd, H., Palarea Albaladejo, J., McNeilly, T., Britton, C. and Ballingall, K.T. (2020). A novel technique for retrospective genetic analysis of the response to vaccination or infection using cell-free DNA from archived sheep serum and plasma. Veterinary Research 51, 9. BMC.

Burge, A.T., Palarea Albaladejo, J., Holland, A.E., Abramson, M.J., McDonald, C.F., Mahal, A., Hill, C.J., Lee, A.L., Cox, N.S., Lahham, A., Moore, R., Nicolson, C., O'Halloran, P., Gillies, R. and Chastin, S.F.M. (2020). The impact of pulmonary rehabilitation on 24-hour movement behaviour in people with chronic obstructive pulmonary disease: new insights from a compositional perspective. Journal of Physical Activity & Health 18(1), 13-20. Human Kinetics.

Talská, R., Menafoglio, A., Hron, K., Egozcue, J.J. and Palarea Albaladejo, J. (2020). Weighting the domain of probability densities in functional data analysis. Stat 9(1), e283. Springer.

Del Pozo Cruz, B., Alfonso-Rosa, R.M., McGregor, D.E., Chastin, S.F.M., Palarea Albaladejo, J. and Del Pozo-Cruz, J. (2020). Sedentary behaviour is associated with depression symptoms: compositional data analysis from a representative sample of 3,233 US adults and older adults assessed with accelerometers. Journal of Affective Disorders 265, 59-62. Elsevier.

Newton, A.C., Valentine, T., McKenzie, B., George, T.S., Guy, D.C. and Hackett, C.A. (2020). Identifying spring barley cultivars with differential response to tillage. Agronomy 10(5), 686.

Abreu, I., Brennan, R.M., Kanichukattu, EN., Stewart, D., Hancock, R.D., McDougall, G. and Hackett, C.A. (2020). Quantitative trait loci mapping of polyphenol metabolites in blackcurrant (Ribes nigrum L.). Metabolomics 16(2), 25. Springer.

Turicchi, J., O'Driscoll, R., Horgan, G.W., Duarte, C., Santos, I., Encantado, JE., Palmeira, AL., Larsen, S., Olsen, JK., Heitmann, BL. and Stubbs, J. (2020). Body weight variability is not associated with changes in risk factors for cardiometabolic disease. International Journal of Cardiology Hypertension 6, 100045.

Larsen, S., Horgan, G.W., Mikkelsen, M-L., Palmeira, AL., Scott, S., Duarte, C., Santos, I., Encantado, JE., O'Driscoll, R., Turicchi, J., Stubbs, J., Heitmann, BL. and Michalowska, J. (2020). Association between objectively measured sleep duration, adiposity and weight loss history. International Journal of Obesity 44(7), 1577-1585.

Mikkelsen, M-L., Berg-beckhoff, G., Frederiksen, P., Horgan, G.W., O'Driscoll, R., Palmeira, AL., Scott, S., Stubbs, J., Heitmann, BL. and Larsen, S. (2020). Estimating physical activity and sedentary behaviour in a free-living environment: a comparative study between Fitbit Charge 2 and Actigraph GT3X. PLoS ONE 15(6), e0234426.

Smith, N., Maloney, N., Shaw, S., Horgan, G.W., Fyfe, C., Martin, J.C., Suter, A., Scott, K.P. and Johnstone, A.M. (2020). Daily Fermented Whey Consumption Alters the Fecal Short-Chain Fatty Acid Profile in Healthy Adults. Frontiers in Nutrition 7, Article 165.

Alnajjar, M., Barik, S.K., Bestwick, C., Campbell, F., Cruickshank, M., Farquharson, FM., Holtrop, G., Horgan, G.W., Louis, P., Moar, K.M., Russell, W., Scobbie, L. and Hoggard, N. (2020). Anthocyanin-enriched Bilberry extract attenuates glycaemic response in overweight volunteers without changes in insulin. Journal of Functional Foods 64.

Larsen, S., Horgan, G.W., Mikkelsen, M-L., Palmeira, AL., Scott, S., Duarte, C., Santos, I., Encantado, JE., O'Driscoll, R., Turicchi, J., Michalowska, J., Stubbs, J. and Heitmann, BL. (2020). Consistent sleep onset and maintenance of body weight after weight loss: An analysis of data from the NoHoW trial. PLOS Medicine 44(7), 1577-1585.

Whybrow, S., Horgan, G.W. and Macdiarmid, J. (2020). Self-reported food intake decreases over recording period in the National Diet and Nutrition Survey. British Journal of Nutrition 124(6), 586-590.

Wang, SP., Rubio, LA., Duncan, S.H., Donachie, G., Holtrop, G., Lo, G., Farquharson, FM., Wagner, J., Parkhill, J., Louis, P., Walker, AW. and Flint, H.J. (2020). Pivotal Roles for pH, Lactate, and Lactate-Utilizing Bacteria in the Stability of a Human Colonic Microbial Ecosystem. mSystems 5(5), e00645-20.

O'Driscoll, R., Turicchi, J., Duarte, C., Michalowska, J., Larsen, S., Palmeira, AL., Heitmann, BL., Horgan, G.W. and Stubbs, J. (2020). A novel scaling methodology to reduce the biases associated with missing data from commercial activity monitors. PLoS ONE.

Scally, C., Rudd, A., Choo, W., Neil, C., Siddiqi, N., Mezincescu, AM., Wilson, HM., Frenneaux, M., Horgan, G.W., Broadhurst, P. and Dawson, D. (2020). The early dynamic of ECG in Takotsubo syndrome presenting with ST-elevation: A comparison with age and gender-matched ST-elevation myocardial infarction. International Journal of Cardiology 320, 7-11.

Wallace, J.M., Agard, JP. and Horgan, G.W. (2020). A new customised placental weight standard redefines the relationship between maternal obesity and extremes of placental size and is more closely associated with pregnancy complications than an existing population standard. Journal of Developmental Origins of Health and Disease 11(4), 350-359.

Johnstone, A.M., Kelly, J., Ryan, S., Romero-Gonzalez, R., McKinnon, H.E.M., Fyfe, C., Näslund, E., Nicolas, RL., Bosscher, D., Bonnema, A., Frontela-Saseta, C., Horgan, G.W., Ze, X.L., Harrold, J.A., Halford, J., Duncan, S.H., Gratz, S.W., Shirazi-Beechey, S. and Flint, H.J. (2020). Nondigestible Carbohydrates Affect Metabolic Health and Gut Microbiota in Overweight Adults after Weight Loss. Journal of Nutrition 150(7), 1859-1870.

Soto-Martin, EC., Warnke, I., Farquharson, FM., Christodoulou, M., Horgan, G.W., Derrien, M., Faurie, J-M., Flint, H.J., Duncan, S.H. and Louis, P. (2020). Vitamin Biosynthesis by Human Gut Butyrate-Producing Bacteria and Cross-Feeding in Synthetic Microbial Communities. MBio 11(4), e00886-20.

O'Driscoll, R., Turicchi, J., Hopkins, M., Horgan, G.W., Finlayson, G. and Stubbs, J. (2020). Improving Energy Expenditure Estimates From Wearable Devices: A Machine Learning Approach. Journal of Sports Sciences 38(13), 1496-1505.

Lonnie, M., Ieva, L., Myers, M., Horgan, G.W., Russell, W. and Johnstone, A.M. (2020). Exploring Health‐Promoting Attributes of Plant Proteins as a Functional Ingredient for the Food Sector: A Systematic Review of Human Interventional Studies. Nutrients 12(8), 2291.

Crabtree, D.R., Buosi, W., Fyfe, C., Horgan, G.W., Manios, Y., Androutsos, O., Giannopoulou, A., Finlayson, G., Beaulieu, K., Meek, CL., Holst, J.J., Van Norren, K., Mercer, J. and Johnstone, A.M. (2020). Appetite Control across the Lifecourse: The Acute Impact of Breakfast Drink Quantity and Protein Content. The Full4Health Project. Nutrients 2020(12), 3710.

Turicchi, J., O'Driscoll, R., Horgan, G.W., Duarte, C., Palmeira, AL., Larsen, S., Heitmann, BL. and Stubbs, J. (2020). Weekly, seasonal and holiday body weight fluctuation patterns among individuals engaged in a European multi-centre behavioural weight loss maintenance intervention. PLoS ONE.

O'Driscoll, R., Turicchi, J., Hopkins, M., Gibbons, C., Larsen, S., Palmeira, AL., Heitmann, BL., Horgan, G.W., Finlayson, G. and Stubbs, J. (2020). The validity of two widely used commercial and research-grade activity monitors, during resting, household and activity behaviours. Health and Technology 10, 637-648.

Melville, L., Van Dijk, J., Mitchell, S., Innocent, G.T. and Bartley, D.J. (2020). Variation in hatching responses of Nematodirus battus eggs to temperature experiences. Parasites and Vectors 13(1). BMC.

Melville, L., Redman, E., Morrison, A., Chen, P.C.R., Avramenko, R., Mitchell, S., Van Dijk, J., Innocent, G.T., Sargison, F., Aitken, C., Gilleard, J.S. and Bartley, D.J. (2020). Large scale screening for benzimidazole resistance mutations in Nematodirus battus, using both pyrosequence genotyping and deep amplicon sequencing, indicates the early emergence of resistance on UK sheep farms. International Journal for Parasitology: Drugs and Drug Resistance 12, 68-76. Elsevier.

Lorenzo-Arribas, A. and Cacheiro, P. (2020). Florence Nightingale's network: Women, power, and scientific collaboration. Significance Magazine 17(2), 22-25. Eds. Brian Tarran. Wiley-Blackwell, London, UK.

Duckett, D., Lorenzo-Arribas, A., Horgan, G.W. and Conniff, A. (2020). Amplification without the event: The rise of the Flexitarian. Journal of Risk Research.

Pooley, C. M., Marion, G., Bishop, S.C., Bailey, R. I. and Doeschl-Wilson, A.B. (2020). Estimating individuals' genetic and nongenetic effects underlying infectious disease transmission from temporal epidemic data. PLoS Computational Biology 16(12), e1008447. PLoS.

Hulme, P.E., Baker, R., Freckleton, R., Hails, R.S., Hartley, M., Harwood, J., Marion, G., Smith, G. C. and Williamson, M. (2020). The Epidemiological Framework for Biological Invasions (EFBI): an interdisciplinary foundation for the assessment of biosecurity threats. NeoBiota 62, 161-192. Pensoft, Sofia & Moscow.

Mayer, C-D., De La Giclais, S.M., Alsehly, F. and Hoppler, S. (2020). Diverse LEF/TCF Expression in Human Colorectal Cancer Correlates with Altered Wnt-Regulated Transcriptome in a Meta-Analysis of Patient Biopsies. Genes 11(5). MDPI (Multidisciplinary Digital Publishing Institute).

Palarea Albaladejo, J. and McKendrick, I.J. (2020). Best practice for the design and statistical analysis of animal studies. Veterinary Record 186, 59-64.

Chen, Y., Nishii, K., Kidner, C., Hackett, C.A. and Moeller, M. (2020). QTL dissection of floral traits in Streptocarpus (Gesneriaceae). Euphytica 216, 110.

Bessell, P.R., Auty, H. K., Roberts, H., McKendrick, I.J., Bronsvoort, M. and Boden, L.A. (2020). A tool for prioritising livestock disease threats to Scotland. Frontiers in Veterinary Science 7. Frontiers.

Taylor, M., Nevison, I.M., Casali, F., Giergiel, M., Giela, A., Campbell, S., Sharp, E., Hartley, G. and Posyniak, A. (2020). Investigation of the distribution of anticoagulant rodenticide residues in red fox (Vulpes vulpes) livers to ensure optimum sampling protocol. Environmental Chemistry and Ecotoxicology 2, 50-55. Elsevier.

Preedy, K., Chaplain, MAJ., Leybourne, DJ., Marion, G. and Karley, A. (2020). Learning-induced switching costs in a parasitoid can maintain diversity of host aphid phenotypes although biocontrol is destabilised under abiotic stress. Journal of Animal Ecology. British ecological Society, London, UK.

Sadigh, Y., Tahiri-Alaoui, A., Spatz, S., Nair, V. and Ribeca, P (2020). Pervasive differential splicing in Marek's Disease Virus can discriminate CVI-988 vaccine strain from RB-1B very virulent strain in chicken embryonic fibroblasts. Viruses 12(3). MDPI (Multidisciplinary Digital Publishing Institute).

Ferretti, L., Perez-Martin, E., Zhang, F., Maree, F., De Klerk-Lorist, L.-M., Van Schalkwykc, L., Juleff, N., Charleston, B. and Ribeca, P (2020). Pervasive within-host recombination and epistasis as major determinants of the molecular evolution of the foot-and-mouth disease virus capsid. PLoS Pathogens 16(1), e1008235. PLoS.

Spezia, L. (2020). Bayesian variable selection in non-homogeneous hidden Markov models through evolutionary Monte Carlo method. Computational Statistics and Data Analysis 143, 106840.

Category: "Book Chapter"

Hron, K., Menafoglio, A., Palarea Albaladejo, J., Filzmoser, P., Talská, R. and Egozcue, J.J. (2020). Weighting of parts in compositional data and its applications. In "Proceedings of 13th International Conference of the ERCIM Working Group on Computational and Methodological Statistics (Virtual CMStatistics 2020)". ECOSTA ECONOMETRICS AND STATISTICS, London, UK.

Fox, N.J., Smith, L.A., Stevenson, K., Davidson, R.S., Marion, G. and Hutchings, M.R. (2020). Infection of non-ruminant wildlife by Mycobacterium avium subsp. paratuberculosis. In "Paratuberculosis: Organism, Disease, Control", 200-212. Eds. M.A. Behr & D.M. Collins. CABI, Wallingford.

Publications

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