Lectures on Statistical Bioinformatics

Held at the Statistics Department of Dortmund University (Germany), January 2002

Dirk Husmeier
Biomathematics and Statistics Scotland
SCRI, Invergowrie, Dundee DD2 5DA
United Kingdom

Searching for homologous sequences: An introduction to the statistical theory of BLAST
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Introduction to hidden Markov models
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Aligning DNA and protein sequences with hidden Markov models
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Introduction to phylogenetics, part 1:
Distance and clustering methods
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Introduction to phylogenetics, part 2:
Likelihood methods
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Introduction to phylogenetics, part 3:
Hypothesis testing, bootstrapping, Bayesian methods, Markov chain Monte Carlo
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Detecting recombination in DNA sequence alignments
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