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Dirk's students and postdocs
Current PhD students
- Alexander Vassilios Mantzaris (2007- )
- Frank Dondelinger (2008-)
Former postdoctoral research associates
Former PhD students
- Wolfgang Lehrach (2003-2007)
PhD thesis: Bayesian machine learning methods for predicting protein-peptide interactions and detecting mosaic structures in DNA sequences alignments - Adriano Velasque Werhli (2004-2007)
PhD thesis: Reconstruction of gene regulatory networks from postgenomic data
Further information and supplementary material
MRes students (1-year research projects)
- Anna Kedzierska (2004-2005)
Joint paper: A heuristic Bayesian method for segmenting DNA sequence alignments and detecting evidence for recombination and gene conversion - Ming Tso Chiang (2003-2004)
Dissertation: Detecting recombination and rate variation in DNA sequence alignments
MSc students 2008
- Frank Dondelinger
Dissertation: Inferring ecological networks from species abundance data: simulation study - Ali Faisal
Dissertation: Inferring ecological networks from species abundance data: application to the European bird atlas project - Antonia Mayer
Dissertation: Inferring active subnetowrks in the interferon-mediated immune response
MSc students 2006
- Alexander Vassilios Mantzaris
Dissertation: Detecting mosaic structures in DNA sequence alignments
MSc students 2004
- Christoforos Anagnostopoulos
Dissertation: Learning probabilistic relational models in the context of reverse engineering genetic networks
Presentation (Powerpoint)
- John Allen
Dissertation: Bridging microarray platforms to extend the utility of gene expression profiles
Software - Fujun Ye
Dissertation: Population Markov chain Monte Carlo and Genetic Networks
Presentation - Ji Won Yoon
Dissertation: Reverse engineering of genetic networks
Presentation
MSc students 2003
- Ming Tso Chiang
Dissertation: Inferring genetic regulatory interactions with dynamic Bayesian networks