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ANALYSIS OF MOLECULAR VARIANCE
INTRODUCTION
Introduction
Applications
Application - zoology
Application - ecology
Application - human genetics
THE METHOD
Analogy with ANOVA
Haploid data
Distances between haplotypes
Total sums of squares
Hierarchical model
Analysis
Sums of squares deviations
Average sample sizes
Distance metrics
Weights matrix
Euclidean distance
Equidistance
Networks
Nucleotide Diversity
Examples
Distance matrices
Phi statistics
Population structure
EXAMPLE
Poplar tree data
Data
Euclidean distance
SOFTWARE
Software for AMOVA analysis
Data - group
Data - distance
Data - population
Settings
Output
CONCLUSION
Summary
References
Glossary