BioSS Publications 2003-2004

Methodology

Allcroft, D.J. & Glasbey, C.A. 2003. A latent Gaussian Markov random field model for spatio-temporal rainfall disaggregation. Applied Statistics 52, 487-498.

Allcroft, D.J. & Glasbey, C.A. 2003. Analysis of crop lodging using a latent variable model. Journal of Agricultural Science 140, 383-393.

Allcroft, D.J. & Glasbey, C.A. 2003. A simulation-based method for model evaluation. Statistical Modelling: An International Journal 3, 1-13.

Allcroft, D.J., Tolkamp, B.J., Glasbey, C.A. & Kyriazakis, I. 2004. The importance of ‘memory’ in statistical models for animal feeding behaviour. Behavioural Processes 67, 99- 109.

Beyersmann, J., Janssen, A. & Mayer, C-D 2004. Efficient rank tests for semiparametric competing risk models. Metrika 60, 73-91.

Brewer, M.J. 2003. Discretisation for inference on Bayesian mixture models. Statistics and Computing 13, 209-219.

Brewer, M.J., Elston, D.A., Hodgson, M.E.A., Stolte, A.M., Nolan, A.J. & Henderson, D.J. 2004. A spatial model with ordinal responses for grazing impact data. Statistical Modelling: An International Journal 4, 127-143.

Durban, M.L., Hackett, C.A., McNicol, J.W., Newton, A.C., Thomas, W.T.B. & Currie, I.D. 2003. The practical use of semiparametric models in field trials. Journal of Agricultural, Biological and Environmental Statistics 8, 48-66.

Ferris, S.J., Kempton, R.A. & Muir, D.D. 2003. Carryover in sensory trials. Food Quality and Preference 14, 299-304.

Filipe, J.A.N. & Rodgers, G.J. 2003. Exact solution of a generalized model for surface deposition. Physical Review E 68, art. no. 027102.

Filipe, J.A.N. & Maule, M.M. 2003. Analytical methods for predicting the behaviour of population models with general spatial interactions. Mathematical Biosciences 183, 13-35.

Filipe, J.A.N. & Maule, M.M. 2004. Effects of dispersal mechanisms on spatio-temporal development of epidemics. Journal of Theoretical Biology 226, 125-141.

Fonseca, S., Wilson, I., Maltin, C.A. & Horgan, G.W. 2003. Slow fibre cluster pattern in pig longissimus muscle: implications for myogenesis. Journal of Animal Science 81, 973-983.

Glasbey, C.A. & Ghazal, P. 2003. Combinatorial image analysis of DNA microarray features. Bioinformatics 19, 194-203.

Gustafsson, J.S., Svensson, R., Glasbey, C.A., Blomberg, A. & Rudemo, M. 2004. Statistical exploration of variation in quantitative two-dimensional gel electrophoresis data. Proteomics 12, 3791-3799.

Hackett, C.A. & Broadfoot, L.B. 2003. The effects of genotyping errors, missing values, and segregation distortion in molecular marker data on the construction of linkage maps. Heredity 90, 33-38.

Hackett, C.A. & Luo, Z.W. 2003. TetraploidMap: construction of a linkage map in autotetraploid species. Journal of Heredity 94, 358-359.

Hackett, C.A., Pande, B. & Bryan, G.J. 2003. Constructing linkage maps in autotetraploid species using simulated annealing. Theoretical and Applied Genetics 106, 1107-1115.

Holtrop, G., Lapierre, H. & Lobley, G.E. 2004. Modelling transport of amino acids into the red blood cells of sheep. Journal of Agricultural Science 142, 577-588.

Holtrop, G., Yu, F., Coop, R.L., Bruce, L.A., Lobley, G.E. & Macrae, J.C. 2004. Endogenous leucine flows at the jejunum and ileum in lambs exposed to the intestinal parasite Trichostrongylus colubriformis. Journal of Animal Feed Sciences 13, 589-613.

Horgan, G.W. 2003. Variance and autocovariance for flexible and efficient texture assessment. Machine Vision and Graphics 12, 267-278.

Horgan, G.W. & Stubbs, J. 2003. Predicting BMR in the obese is difficult. International Journal of Obesity 57, 335-340.

Husmeier, D. 2003. Sensitivity and specificity of inferring genetic regulatory interactions from microarray experiments with dynamic Bayesian networks. Bioinformatics 19, 2271-2282.

Husmeier, D. 2003. Reverse engineering of genetic networks with Bayesian networks. Biochemical Society Transactions 31, 1516-1518.

Husmeier, D. 2003. Detecting recombination in 4-taxa DNA sequence alignments with Bayesian hidden Markov models and Markov chain Monte Carlo. Molecular Biology and Evolution 20, 315-337.

Marion, G.R., Gibson, G.J. & Renshaw, E. 2003. Estimating likelihoods for spatiotemporal models using importance sampling. Statistics and Computing 13, 111-119.

McKendrick, I.J. 2004. The role of the statistician in the Scottish Agricultural and Biological Research Institutes. Alternatives to Laboratory Animals 32, 23-27.

Milne, I., Wright, F.G., Rowe, G., Marshall, D., Husmeier, D. & McGuire, G. 2004. TOPALi: software for automatic identification of recombinant sequences within DNA multiple alignments. Bioinformatics 20, 1806-1807.

Potts, J.M. 2003. Basic concepts. Forecast Verification: A Practitioner’s Guide in Atmospheric Science. (Jolliffe I.T. and Stephenson D., eds.) Wiley, Chichester, 13-36.

Potts, J.M., Hirst, D.J., Miller, J.D., Edwards, A.C. & Elston, D.A. 2003. Comparison of trends in stream water quality. Hydrological Processes 17, 2449-2462.

Rutherford, K.M.D., Haskell, M.J., Glasbey, C.A., Jones, R.B. & Lawrence, A.B. 2004. Fractal analysis of animal behaviour as an indicator of animal welfare. Animal Welfare 13, S99-S103.

Theobald, C.M., Glasbey, C.A., Horgan, G.W. & Robinson, C.D. 2004. Principal component analysis of landmarks from reversible images. Applied Statistics 53, 163-175.

Theobald, C.M. & Talbot, M. 2004. Bayesian selection of fertilizer level when crop price depends on quality. Computational Statistics and Data Analysis 47, 867-880.

van der Heijden, G.W.A.M. & Glasbey, C.A. 2003. Calibrating spectral images using penalised likelihood. Real Time Imaging 9, 231-236.

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