Search results for year 2019

Result count: 55

To appear:

Category: "Refereed journal"

Polansky, L., Mitchell, L. and Newman, K (2019). Using Multistage Design‐Based Methods to Construct Abundance Indices and Uncertainty Measures for Delta Smelt. Transactions of the American Fisheries Society. Taylor and Francis Online.

Published:

Category: "Refereed journal"

Barratt, A., Rich, K., Eze, J, Porphyre, T., Gunn, G. J. and Stott, A.W. (2019). Framework for Estimating Indirect Costs in Animal Health Using Time Series Analysis. Frontiers in Veterinary Science 6, 190. Frontiers.

Barreto, B., Rivera, FP., Braga, R., Ferreira, M. and Horgan, G.W. (2019). Development of an optical technique for characterizing presence of soil surface crusts. Computers and Electronics in Agriculture 167, 105050.

Bennett, A.E., Preedy, K., Golubski, A., Umbanhower, J., Borrett, S.R., Byrne, L., Apostol, K., Bever, J.D., Biederman, L., Classen, A.T., Cuddington, K., De Graaf, M., Garrett, K., Gross, L., Hastings, A.M., Hoeksema, J.D., Hrynkiv, V., Karst, J., Kummel, M., Lee, C.T., Liang, C., Liao, W., Mack, K., Miller, L., Ownley, B., Rojas, C., Simms, E.L., Walsh, V.K., Warren, M. and Zhu, J. (2019). Beyond the Black Box: Promoting mathematical collaborations for elucidating interactions in soil ecology. Ecosphere 10(7), e02799. Wiley, Washington, DC.

Bloodworth, J.W., Baptie, M.C., Preedy, K., Best, J., O'Reilly, M.G. and Pirie, D. (2019). Negative effects of the sea lice therapeutant emamectin benzoate at low concentrations on benthic communities around Scottish fish farms. Science of the Total Environment 669, 91-102. Elsevier.

Bourke, PM., Hackett, C.A., Voorrips, R., Visser, R.G.F. and Maliepaard, C. (2019). Quantifying the power and precision of QTL analysis in autopolyploids under bivalent and multivalent genetic models. G3: Genes, Genomes, Genetics 9(7), 2107-2122.

Cayuela-Sánchez, J.A. and Palarea Albaladejo, J. (2019). Olive oil nutritional labeling by using Vis/NIR spectroscopy and compositional statistical methods. Innovative Food Science and Emerging Technologies 51(2019), 139-147. Elsevier.

Dyck, KN., Bashir, S., Horgan, G.W. and Sneddon, A. (2019). Regular crabmeat consumers do not show increased urinary cadmium or beta-2-microglobulin levels compared to non-crabmeat consumers. Journal of Trace Elements in Medicine and Biology 52, 22-28. Elsevier.

Eze, J., Innocent, G.T., Adam, K., Huntley, S. and Gunn, G. J. (2019). Exploring the longitudinal dynamics of herd BVD antibody test results using model-based clustering. Scientific Reports. Nature Publishing Group.

Fitzgerald, S., Beckett, A., Palarea Albaladejo, J., McAteer, S., Shaaban, S., Morgan, J., Ahmad, N.I., Bono, J.L., Gally, D.L. and McNeilly, T. (2019). Shiga toxin sub-type 2a increases the efficiency of Escherichia coli O157 transmission between animals and restricts epithelial regeneration in bovine enteroids. PLoS Pathogens 15(10), e1008003. PLoS.

Glendell, M., Palarea Albaladejo, J., Pohle, I., Marrero, S., McCreadie, B., Cameron, G. and Stutter, M. (2019). Modelling the link between phosphorus and ecological impact among multiple stressors. Journal of Environmental Quality 48, 1336-1346. ASA, CSSA and SSSA, USA.

Hamilton, C.M., Black, L.E., Oliveira, S., Burrells, A., Bartley, P.M., Melo, R.P.B., Chianini, F., Palarea Albaladejo, J., Innes, E.A., Kelly, P.J. and Katzer, F. (2019). Comparative virulence of Caribbean, Brazilian and European isolates of Toxoplasma gondii . Parasites and Vectors 12(2019), 104. BMC.

Hayward, NJ., McDougall, G., Farag, S., Allwood, J.W., Austin, C., Campbell, F., Horgan, G.W. and Ranawana, V. (2019). Cinnamon Shows Antidiabetic Properties that Are Species-Specific: Effects on Enzyme Activity Inhibition and Starch Digestion. Plant Foods for Human Nutrition. Elsevier.

Hester, A.J., Hewison, R.L., Ross, L.C. and Potts, J.M. (2019). Long-term vegetation change in Scotland's native forests. Biological Conservation 235, 136-146. Elsevier.

Hopkins, M., Finlayson, G., Duarte, C., Gibbons, C., Johnstone, A.M., Whybrow, S., Horgan, G.W., Blundell, J. and Stubbs, J. (2019). Biological and psychological mediators of the relationships between fat mass, fat-free mass and energy intake. International Journal of Obesity 43(2), 233-242.

Hopkins, M., Duarte, C., Beaulieu, K., Gibbons, C., Finlayson, G., Johnstone, A.M., Whybrow, S., Horgan, G.W., Blundell, J. and Stubbs, J. (2019). Activity Energy Expenditure is an Independent Predictor of Energy Intake in Humans. International Journal of Obesity 43(7), 1466-1474.

Horgan, G.W., Scalco, A., Craig, T., Whybrow, S. and Macdiarmid, J. (2019). Social and Situational Influences on meat consumption in the UK population. Appetite.

Hughes, G., Topp, C., Butler, A., Nevison, I.M., Oxley, S. and Havis, N. (2019). Rhynchosporium leaf scald: severity, incidence, seed source, and spatial pattern. Plant Pathology 68(6), 1179-1187. Wiley.

Kettle, H., Sann, C. and Marion, G. (2019). Quantifying parasitoid and predator controls on rice hopper eggs using a dynamic stage-structured model and field data. Journal of Applied Ecology 56(11), 2536-2550.

Lorgen-Richie, M., Murray, AD., Ferguson-Smith, A., Richards, M., Horgan, G.W., Phillips, L., Hoad, G., Gall, I., Harrison, K., McNeill, G., Ito, M. and Haggarty, P. (2019). Imprinting methylation in SNRPN and MEST1 in adult blood predicts cognitive ability. PLoS ONE.

Martin-Ortega, J., Dekker, T., Ojea, E. and Lorenzo-Arribas, A. (2019). Dissecting price setting efficiency in Payments for Ecosystem Services: A meta-analysis of payments for watershed services in Latin America. Ecosystem Services 38.

McGregor, D.E., Palarea Albaladejo, J., Dall, P.M., Hron, K. and Chastin, S.F.M. (2019). Cox regression survival analysis with compositional covariates: application to modelling mortality risk from 24-hour physical activity patterns. Statistical Methods in Medical Research, https://doi.org/10.1177/09622802. SAGE.

McLachlan, I., Marion, G., McKendrick, I.J., Porphyre, T., Handel, I. and Bronsvoort, M. (2019). Endemic foot and mouth disease: pastoral in-herd disease dynamics in sub-Saharan Africa. Scientific Reports 9, 17349. Nature Publishing Group.

McLean, F.H., Campbell, F., Langston, R.F., Sergi, D., Resch, C., Grant, C., Morris, A., Mayer, C-D. and Williams, L. (2019). A high-fat diet induces rapid changes in the mouse hypothalamic proteome. Nutrition and Metabolism 16(26). BMC.

Mitchell, L., Newman, K and Baxter, R. (2019). Estimating the Size Selectivity of Fishing Trawls for a Short-Lived Fish Species. San Francisco Estuary and Watershed Science 17(1), 24. UC Davis John Muir Institute of the Environment, Davis, California USA.

Munoz-Tamayo, R., Ramirez-Agudelo, J.F., Dewhurst, R.J., Miller, G., Vernon, T and Kettle, H. (2019). A parsimonious software sensor for estimating the individual dynamic pattern of methane emission from cattle. Animal 13(6), 1180-1187. Cambridge University Press.

Newton, A.C., Guy, D.C. and Hackett, C.A. (2019). Grain and straw yield interactions in barley cultivar mixtures. Journal of Agricultural Science 157(2), 117-128.

Nisbet, A.J., McNeilly, T., Price, D. R. G., Oliver, E.M., Bartley, Y., Mitchell, M.C., Palarea Albaladejo, J. and Matthews, J.B. (2019). The rational simplification of a recombinant cocktail vaccine to control a parasitic nematode. International Journal for Parasitology 49(2019), 257-265. Elsevier.

Nunn, F., Bartley, K., Palarea Albaladejo, J., Innocent, G.T., Turnbull, F., Wright, H. and Nisbet, A.J. (2019). A novel, high-welfare methodology for evaluating poultry red mite interventions in vivo. Veterinary Parasitology 267(2019), 42-46. Elsevier.

Owen, H., Pearson, K., Roberts, A.M.I., Reid, A. and Russell, J. (2019). Single nucleotide polymorphism assay to distinguish barley (Hordeum vulgare L.) varieties in support of seed certification. Genetics Resources and Crop Evolution 66(6), 1243-1256. Springer, Netherlands.

Park, J., Hackett, C.A., Dandurand, L-M., Wang, X. and De Jong, W. S. (2019). QTL for resistance to Globodera rostochiensis pathotype Ro2 and G. pallida pathotype Pa2/3 in autotetraploid potato. American Journal of Potato Research 96(6), 552-563.

Pohle, I., Helliwell, R., Aube', C., Gibbs, S., Spencer, M. and Spezia, L. (2019). Citizen science evidence from the past century shows that Scottish rivers are warming. Science of the Total Environment 659, 53-65.

Pooley, C., Bishop, S.C., Doeschl-Wilson, A.B. and Marion, G. (2019). Posterior-based proposals for speeding up Markov chain Monte Carlo. Royal Society Open Science 6, 190619. Royal Society Publshing.

Preedy, K., Brennan, R.M., Jones, H G. and Gordon, S. (2019). Improved models of the effects of winter chilling on blackcurrant (Ribes nigrum L.) show cultivar specific sensitivity to warm winters. Agriculture and Forest Meteorology 280, 107777. Eds. X. Lee. Elsevier.

Prentice, J.C., Fox, N.J., Hutchings, M.R., White, P.C.L., Davidson, R.S. and Marion, G. (2019). When to kill a cull: factors affecting the success of culling wildlife for disease control. Journal of the Royal Society Interface 16, 20180901. Royal Society Publshing, London, UK.

Rasmussen, C.L., Palarea Albaladejo, J., Korshoj, M., Gupta, N., Nabe-Nielsen, K., Holtermann, A. and Jørgensen, M.B. (2019). Is high aerobic workload at work associated with leisure time physical activity and sedentary behaviour among blue-collar workers? A compositional data analysis based on accelerometer data. PLoS ONE 14(6), e0217024. PLoS.

Reynolds, C., Horgan, G.W., Whybrow, S. and Macdiarmid, J. (2019). Healthy and sustainable diets that meet GHGE reduction targets and are affordable for different income groups in the UK. Public Health Nutrition 22(8), 1503-1517.

Ribeiro, R., Eze, J, Gilbert, L., Gunn, G. J., Macrae, A.I. and Auty, H. (2019). Using imperfect data in predictive mapping of vectors: a regional example of Ixodes ricinus distribution. Parasites and Vectors 12, 536. BMC.

Scalco, A., Macdiarmid, J., Craig, T., Whybrow, S. and Horgan, G.W. (2019). An agent-based model to simulate meat consumption behaviour of consumers in Britain. Journal of Artificial Societies and Social Simulation 22(4), 8.

Scally, C., Abbas, H., Ahearn, TS., Srivanasan, J., Rudd, A., Mezincescu, AM., Spath, N., Yucel-Finn, A., Yuecel, R., Dospinescu, C., Horgan, G.W., Broadhurst, P., Henning, A., Newby, DE., Semple, S., Wilson, HM. and Dawson, D. (2019). Myocardial and Systemic Inflammation in Acute Stress-Induced (Takotsubo) Cardiomyopathy. Circulation 139(13), 1581-1592.

Schofield, E.J., Rowntree, J., Paterson, E., Brewer, M.J., Price, E., Brearley, F. and Brooker, R.W. (2019). Cultivar differences and impact of plant-plant competition on temporal patterns of nitrogen and biomass accumulation. frontiers in plant science 10, 215.

Scott, S., Duarte, C., Evans, E.H., Harjumaa, M., Heitmann, BL., Horgan, G.W., Larsen, S., Marques, MM., Mattila, E., Matos, M., Mikkelsen, M-L., Palmeira, AL., Pearson, B., Ramsey, L., Sainsbury, K., Santos, I., Sniehotta, FF., Stalker, C., Teixeira, PJ. and Stubbs, J. (2019). The NoHoW protocol: A 2x2 factorial randomized controlled trial investigating an evidence-based digital toolkit for weight loss maintenance in European adults. BMJ Open 9(9), e029425.

Sitt, T., Kenney, M., Barrera, J., Pandya, M., Eckstrom, K., Warner, M., Pacheco, J.M., LaRocco, M., Palarea Albaladejo, J., Brake, D., Rieder, E., Arzt, J., Barlow, J.W. and Golde, W.T. (2019). Duration of protection and humoral immunity induced by an adenovirus- vectored foot-and-mouth disease virus serotype A24 subunit vaccine in Holstein steers. Vaccine 37, 6221-6231. Elsevier.

Smith, L.A., Swain, D.L., Innocent, G.T., Nevison, I.M. and Hutchings, M.R. (2019). Considering appropriate replication in the design of animal social network studies. Scientific Reports 9, 7208. Springer Nature.

Spezia, L. (2019). Modelling covariance matrices by the trigonometric separation strategy with application to hidden Markov models. Test 28, 399-422.

Vorstius, C., Rowan, J.S., Brown, I., Frogbrook, Z. and Palarea Albaladejo, J. (2019). Large-scale risk screening of raw water quality in the context of drinking water catchments and integrated response strategies. Environmental Science and Policy 100(2019), 84-93. Elsevier.

Wattegedera, S., Doull, L., Goncheva, M.I., Wheelhouse, N.M., Watson, D.M., Pearce, J., Benavides, J., Palarea Albaladejo, J., McInnes, C.J., Ballingall, K.T. and Entrican, G. (2019). Immunological homeostasis at the ovine placenta may reflect the degree of maternal fetal interaction. Frontiers in Immunology 9, 3025. Frontiers.

Winder, L., Alexander, C.J., Griffiths, G., Holland, J.M., Woolley, C. and Perry, J.N. (2019). Twenty years and counting with SADIE: Spatial Analysis by Distance Indices software and review of its adoption and use. Rethinking Ecology 4, 1-16. Pensoft.

Category: "Book Chapter"

Štefelová, N., Alfons, A., Palarea Albaladejo, J., Filzmoser, P. and Hron, K. (2019). Robust regression with compositional covariates including cellwise outliers. In "Book of Abstracts of the 8th International Workshop on Compositional Data Analysis (CoDaWork2019)", 79. Eds. M.I. Ortego. Universitat Politecnica de Catalunya-BarcelonaTECH, Barcelona, Spain.

Comas-Cufi, M., Mateu-Figueras, G., Palarea Albaladejo, J. and Martin-Fernandez, J.A. (2019). A parametric-multiplicative treatment of count zeros in compositional data sets. In "Book of Abstracts of the 8th International Workshop on Compositional Data Analysis (CoDaWork2019)", 66. Eds. M.I. Ortego. Universitat Politecnica de Catalunya-BarcelonaTECH, Barcelona, Spain.

McGregor, D.E., Palarea Albaladejo, J., Dall, P.M., Hron, K. and Chastin, S.F.M. (2019). Cox regression survival analysis with compositional covariates: application to modelling mortality risk from 24-hour physical activity patterns. In "Book of Abstracts of the 8th International Workshop on Compositional Data Analysis (CoDaWork2019)", 49. Eds. M.I. Ortego. Universitat Politecnica de Catalunya-BarcelonaTECH, Barcelona, Spain.

Newman, K (2019). Population Demography for Ecology. In "Handbook of Environmental and Ecological Statistics". Chapman & Hall.

Settele, J., Spangenberg, J., OTHER AUTHORS, +54. and Marion, G. (2019). Rice Ecosystem Services in South-East Asia: The LEGATO Project, Its Approaches and Main Results with a Focus on Biocontrol Services. In "Atlas of Ecosystem Services,". Eds. M. Schröter et al.. Springer Nature, Heidelberg.

Simpson, C.G., Fuller, J., Rapazote-Flores, P., Mayer, C-D., Calixto, C., Milne, L., Hedley, P.E., Booth, C., Waugh, R. and Brown, J.W.S. (2019). High-Resolution RT-PCR Analysis of Alternative Barley Transcripts. In "Barley", 269-281. Humana Press.

Talská, R., Menafoglio, A., Hron, K., Egozcue, J.J. and Palarea Albaladejo, J. (2019). Changing reference measure in Bayes spaces and its effects in statistical processing of density functions. In "Book of Abstracts of the 8th International Workshop on Compositional Data Analysis (CoDaWork2019)", 24. Eds. M.I. Ortego. Universitat Politecnica de Catalunya-BarcelonaTECH, Barcelona, Spain.

Publications

Unless explicitly stated otherwise, all material is copyright © Biomathematics and Statistics Scotland. Biomathematics and Statistics Scotland (BioSS) is formally part of The James Hutton Institute (JHI), a registered Scottish charity No. SC041796 and a company limited by guarantee No. SC374831. Registered Office: JHI, Invergowrie, Dundee, DD2 5DA, Scotland