Search results for year 2010

Result count: 64

Published:

Category: "Refereed journal"

Ballingall, K.T., Rocchi, M.S., McKeever, D.J. and Wright, F. (2010). Trans-species polymorphism and selection in the MHC class II DRA genes of domestic sheep. PLoS ONE 5, e11402.

Beale, C.M., Lennon, J.J., Yearsley, J.M., Brewer, M.J. and Elston, D.A. (2010). Regression analysis of spatial data. Ecology Letters 13, 246-264.

Bessell, P.R., Matthews, L., Smith-Palmer, A., Rotariu, O., Strachan, N.J.C., Forbes, K.J., Cowden, J., Reid, S.W.J. and Innocent, G.T. (2010). Geographic determinants of reported human Campylobacter infections in Scotland. BioMed Central Public Health 10, 423.

Bierman, S., Butler, A., Marion, G. and Kühn, I. (2010). Bayesian image restoration models for combining expert knowledge on recording activity with species distribution data. Ecography 33, 451-460.

Bilton, M., Whitlock, R., Grime, J.P., Marion, G. and Pakeman, R.J. (2010). Genotypic differences in growth strategy among coexisting individuals from populations of Festuca ovina and Koeleria macrantha. Botany 88, 939-952.

Brulisauer, F., Lewis, F.I., Ganser, A., McKendrick, I.J. and Gunn, G.J. (2010). The prevalence of bovine viral diarrhoea in beef suckler herds in Scotland. Veterinary Journal 186, 226-231.

Chen, X., Hackett, C.A., Niks, R.E., Hedley, P.E., Booth, C., Druka, A., Marcel, T.C., Vels, A., Bayer, M.M., Milne, I., Morris, J., Ramsay, L., Marshall, D., Cardle, L. and Waugh, R. (2010). An eQTL analysis of Partial Resistance to Puccinia hordei in Barley. PLoS ONE 5(1), e8598.

Dagleish, M.P., Hamilton, S., Gonzalez, L., Eaton, S.L., Steele, P.J., Finlayson, J., Siso, S., Pang, Y.P., Sales, J., Chianini, F. and Jeffrey, M. (2010). Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology 91, 3116-3123.

Dagleish, M.P., Finlayson, J., Bayne, C., MacDonald, S., Sales, J. and Hodgson, J.C. (2010). Characterization and time course of pulmonary lesions in calves after intratracheal challenge with Pasteurella multocida A:3. Journal of Comparative Pathology 142, 157-169.

Denwood, M.J., Reid, S.W.J., Love, S., Nielsen, M.K., Matthews, L., McKendrick, I.J. and Innocent, G.T. (2010). Comparison of three alternative methods for analysis of equine faecal egg count reduction test data. Preventive Veterinary Medicine 93(4), 316-323.

Dobson, G., Shepherd, L.V.T., Verrall, S.R., Griffiths, D.W., Ramsay, G., McNicol, J.W., Davies, H.V. and Stewart, D. (2010). A metabolomics study of cultivated potato (Solanum tuberosum) groups, Andigena, Phureja, Stenotomum and Tuberosum using gas chromatography mass spectrometry. Journal of Agricultural and Food Chemistry 58, 1214-1223.

Dupuy, L., Vignes, M., McKenzie, B. and White, P.J. (2010). The dynamics of root meristem distribution in soil. Plant Cell and Environment 33, 358-369.

Duthie, S.J., Horgan, G.W., de Roos, B., Rucklidge, G., Reid, M., Duncan, G., Pirie, L.P., Basten, G.P. and Powers, H.J. (2010). Blood folate status and expression of proteins involved in immune function, inflammation, and coagulation: biochemical and proteomic changes in the plasma of humans in response to long-term synthetic folic acid supplementation. Journal of Proteome Research 9(4), 1941-1950.

Faisal, M.A., Dondelinger, F., Husmeier, D. and Beale, C. (2010). Inferring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods. Ecological Informatics 5(6), 451-464.

Fyfe, C., Stewart, J., Murison, S.D., Jackson, D., Rance, K., Speakman, J., Horgan, G.W. and Johnstone, A.M. (2010). Evaluating energy intake measurement in free-living subjects: when to record and for how long. Public Health Nutrition 13(2), 172-180.

Getachew, A.M., Innocent, G.T., Trawford,, A., Reid, S.W.J. and Love, S. (2010). Epidemiological features of fasciolosis in working donkeys in Ethiopia. Veterinary Parasitology 169(3-4), 335-339. Blackwell and Hall, Almería, Spain.

Goncalves, R., Anderson, T.J., Innocent, G.T. and Penderis, J. (2010). Effect of seizures on cerebrospinal fluid analysis in dogs with idiopathic epilepsy. Veterinary Record 166(16), 497-498.

Grzegorczyk, M., Husmeier, D. and Rahnenführer, J. (2010). Modelling non-stationary gene regulatory processes. Advances in Bioinformatics 2010(doi:10.1155/2010/749848), ID 749848.

Hackett, C.A., Russell, J.R., Jorgensen, L., Gordon, S.L. and Brennan, R.M. (2010). Multi-environment QTL mapping in blackcurrant (Ribes nigrum L.) using mixed models. Theoretical and Applied Genetics 121(8), 1483-1488.

Hedley, P.E., Russell, J.R., Jorgensen, L., Gordon, S., Morris, J.A., Hackett, C.A., Cardle, L. and Brennan, R.M. (2010). Candidate genes associated with bud dormancy release in blackcurrant ( Ribes nigrum L.). BMC Plant Biology 10, 202.

Helliwell, R., Britton, A.J., Gibbs, S., Fisher, J.M. and Potts, J.M. (2010). Interactive effects of N deposition, land management and weather patterns on soil solution chemistry in a Scottish alpine heath. Ecosystems 13(5), 696-711.

Hotchkiss, E., Dagleish, M.P., Willoughby, K., McKendrick, I.J., Finlayson, J., Zadoks, R.N., Newsome, E., Brulisauer, F., Gunn, G.J. and Hodgson, J.C. (2010). Prevalence of Pasteurella multocida and other respiratory pathogens in the nasal tract of Scottish calves. Veterinary Record 167(15), 555-560.

Johnson, S.N., Gregory, P.J., McNicol, J.W., Oodally, Y., Zhangd, X. and Murray, P.J. (2010). Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology 44, 75-79.

Louis, P., Young, P., Holtrop, G. and Flint, H.J. (2010). Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environmental Microbiology 12(2), 304-314.

Magurran, A.E., Baillie, S.R., Buckland, S.T., Dick, J.McP., Elston, D.A., Scott, E.M., Smith, R.I., Somerfield, P.J. and Watt, A.D. (2010). Long-term datasets in biodiversity research and monitoring: assessing change in ecological communities through time. Trends in Ecology and Evolution 25(10), 574-582.

McCallum, S., Woodhead, M., Hackett, C.A., Kassim, A., Paterson, A. and Graham, J. (2010). Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry. Theoretical and Applied Genetics 121, 611-627.

Meeuwsen, S., Horgan, G.W. and Elia, M. (2010). The relationship between BMI and percent body fat, measured by bioelectrical impedance, in a large adult sample is curvilinear and influenced by age and sex. Clinical Nutrition 29(5), 560-566.

Milne, I., Bayer, M.M., Cardle, L., Shaw, P., Stephen, G., Wright, F. and Marshall, D.F. (2010). Tablet - next generation sequence assembly visualization. Bioinformatics 26, 401-402.

Mitchell, R.J., Hester, A.J., Campbell, C.D., Chapman, S.J., Cameron, C.M., Hewison, R.L. and Potts, J.M. (2010). Is vegetation composition or soil chemistry the best predictor of the soil microbial community. Plant and Soil 333(1-2), 417-430.

Montero-Serrano, J.C., Palarea Albaladejo, J., Martin-Fernandez, J.A., Martinez-Santana, M. and Gutierrez-Martin, J.V. (2010). Sedimentary chemofacies characterization by means of multivariate analysis. Sedimentary Geology 228(3-4), 218-228.

Morris, W.L., Shepherd, T., Verrall, S.R., McNicol, J.W. and Taylor, M.A. (2010). Relationships between volatile and non-volatile metabolites and attributes of cooked potato flavour. Phytochemistry 71, 1765-1773.

Navajas, E., Glasbey, C.A., Fisher, A.V., Ross, D., Hyslop, J.J., Richardson, R.I., Simm, G. and Roehe, R. (2010). Assessing beef carcass composition using computed tomography spirals of primal cuts. Meat Science 84, 30-38.

Ouellet, D.R., Berthiaume, R., Holtrop, G., Lobley, G.E., Martineau, R. and Lapierre, H. (2010). Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science 93, 4252-4261.

Paroli, R. and Spezia, L. (2010). Reversible jump MCMC methods and segmentation algorithms in hidden Markov models. Australian & New Zealand Journal of Statistics 52, 151-166.

Pickles, B.J., Genney, D., Potts, J.M., Lennon, J.J., Anderson, I.C. and Alexander, I.J. (2010). Spatial and temporal ecology of Scots pine ectomycorrhizas. New Phytologist 186(3), 755-768.

Pollock, K.G.J., Ternent, H., Mellor, D.J., Chalmers, R.M., Smith, H.V., Ramsay, C.N. and Innocent, G.T. (2010). Spatial and Temporal Epidemiology of Sporadic Human Cryptosporidiosis in Scotland. Zoonoses and Public Health 57(7-8), 487-492. Blackwell and Hall, Almería, Spain.

Raczynska, K.D., Simpson, C.G., Ciesiolka, A., Szewc, L., Lewandowska, D., McNicol, J.W., Szweykowska-Kulinska, Z., Brown, J.W.S. and Jarmolowski, A. (2010). Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thalania. Nucleic Acids Research 38(1), 265-278.

Rhind, S.M., Kyle, C.E., Mackie, C., McDonald, L., Zhang, Z., Duff, E.I., Bellingham, M., Amezaga, M.R., Mandon-Pepin, B., Loup, B., Cotinot, C., Evans, N.P., Sharpe, R.M. and Fowler, P.A. (2010). Maternal and fetal tissue accumulation of selected endocrine disrupting compounds (EDC) following exposure to sewage sludge-treated pastures before or after conception. Journal of Environmental Monitoring 12(8), 1582-1593.

Robinson, G., Wright, S., Elwin, K., Hadfield, S.J., Katzer, F., Bartley, P.M., Hunter, P.R., Nath, M., Innes, E.A. and Chalmers, R.M. (2010). Re-description of Cryptosporidium cuniculus Inman and Takeuchi, 1979 (Apicomplexa: Cryptosporidiidae); morphology, biology and phylogeny. International Journal for Parasitology 40(13), 1539-1548.

Rotariu, O., Smith-Palmer, A., Cowden, J., Bessell, P.R., Innocent, G.T., Reid, S.W.J., Matthews, L., Dallas, J., Ogden, I.D., Forbes, K.J. and Strachan, N.J.C. (2010). Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes. Epidemiology and Infection 138, 1744-1747.

Shaw, R.F., Elston, D.A., Pakeman, R.J., Young, M.R. and Iason, G.R. (2010). The impacts of pollination mode, plant characteristics and local density on the reproductive success of a scarce plant species, Salix arbuscula . Plant Ecology 211(2), 367-377.

Shepherd, L.V.T., Alexander, C.J., Sungurtas, J., McNicol, J.W., Stewart, D. and Davies, H.V. (2010). Metabolomic analysis of the potato tuber life cycle. Metabolomics 6(2), 274-291.

Shepherd, L.V.T., Bradshaw, J.E., Dale, F., McNicol, J.W., Pont, S.D.A., Mottram, D.S. and Davies, H.V. (2010). Variation in acrylamide producing potential in potato: segregation of the trait in a breeding population. Food Chemistry 123, 568-573.

Smith, L., Wells, K., Marion, G., Swain, D.L. and Hutchings, M.R. (2010). Effects of group composition on the grazing behaviour of herbivores. Animal Behaviour 80, 527-534.

Spezia, L. (2010). Bayesian analysis of multivariate Gaussian hidden Markov models with an unknown number of components. Journal of Time Series Analysis 31, 1-11.

Stushnoff, C., Ducreux, L.J.M., Hancock, R.D., Hedley, P.E., Holm, D., McDougall, G., McNicol, J.W., Morris, J., Morris, W.L., Sungurtas, J., Verrall, S.R., Zuber, T. and Taylor, M.A. (2010). Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany 61, 1225-1238.

Tetzlaff, D., Brewer, M.J., Malcolm, I.A. and Soulsby, C. (2010). Storm flow and baseflow response to reduced acid deposition - using Bayesian compositional analysis in hydrograph separation with changing end members. Hydrological Processes 24(16), 2300-2312.

Tighe, P., Duthie, G.G., Vaughan, N., Brittenden, J., Simpson, W.G., Duthie, S.J., Mutch, W., Wahle, K.W., Horgan, G.W. and Thies, F. (2010). Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomized controlled trial. American Journal of Clinical Nutrition 92(4), 733-740.

Vittoz, P., Bayfield, N.G., Brooker, R.W., Elston, D.A., Duff, E.I., Theurillat, J-P. and Guisan, A. (2010). Reproducibility of species lists, visual cover estimates and frequency methods for recording high mountain vegetation. Journal of Vegetation Science 21(6), 1035-1047.

Watkins, C.A., Schock, A., May, L., Denham, S., Sales, J., Welch, L., Sharp, J.M. and Stevenson, K. (2010). Assessing virulence of vaccine strains of Mycobacterium avium subspecies paratuberculosis in a calf model. Veterinary Microbiology 146(1-2), 63-69.

Wattegedera, S., Watson, D.M., Hope, J.C., Kaiser, P., Sales, J., McInnes, C.J. and Entrican, G. (2010). Relative quantitative kinetics of interferon-gamma and interleukin-10 mRNA and protein production by activated ovine peripheral blood mononuclear cells. Veterinary Immunology and Immunopathology 136, 34-42.

Wheelhouse, N., Katzer, F., Wright, F. and Longbottom, D. (2010). Novel Chlamydia-like organisms as cause of bovine abortions, UK. Emerging Infectious Diseases 16(8), 1323-1324.

Woodhead, M., Weir, A., Smith, K., McCallum, S., MacKenzie, K. and Graham, J. (2010). Functional markers for red raspberry. Journal of the American Society for Horticultural Science 135, 418-427.

Zhang, X-S., Chase-Topping, M.E., McKendrick, I.J., Savill, N.J. and Woolhouse, M.E.J. (2010). Spread of E. coli O157 infection among Scottish cattle farms: Stochastic models and model selection. Epidemics 2, 11-20.

Category: "Book Chapter"

Braga, R., Horgan, G.W. and Glasbey, C.A. (2010). Optical metrology in agriculture. In "Agriculture Research and Technology", 303-329. Eds. K. Bundgaard and L. Isaksen. Nova Science Publishers, Hauppauge, USA.

Brewer, M.J., Beale, C.M., Baker, N.E. and Lennon, J.J. (2010). Modelling observer effort in spatio-temporal modelling of Tanzanian bird data. In "International Workshop on Spatio-Temporal Modelling (METMAV)", 38-41. Unidixital, Santiago de Compostela, Spain.

Dondelinger, F., Lebre, S. and Husmeier, D. (2010). Heterogeneous continuous dynamic Bayesian networks with flexible structure and inter-time segment information sharing. In "Proceedings of the International Conference on Machine Learning (ICML 2010)", 303-310. Eds. Furnkranz J. and Joachims T.. Omnipress, Madison, Wisconsin, USA..

Hutchings, M.R., Stevenson, K., Greig, A., Davidson, R.S., Marion, G. and Judge, J. (2010). Infection of non-ruminant wildlife by Mycobacterium avium subsp. paratuberculosis. In "Paratuberculosis: Organism, Disease, Control", 188-200. Eds. M.A. Behr & D.M. Collins. CABI, Wallingford.

Lin, K. and Husmeier, D. (2010). Mixtures of factor analyzers for modelling transcriptional regulation. In "Learning and Inference in Computational Systems Biology", 153-200. Eds. N Lawrence, M Rattray, M Girolami and G Sanguinetti. The MIT Press.

Marion, G., Butler, A., Catterall, S., Cook, A.R., Doherty, R., Kühn, I., Reineking, B., Schweiger, O. and Hulme, P. (2010). Statistical aspects of biodiversity risk assessment. In "Atlas of Biodiversity Risk", 58-61. Eds. Josef Settele et al.. Pensoft, Sofia & Moscow.

Marion, G., Grabaum, R., Bierman, S., Butler, A., Grescho, V., Spangenberg, J., Kühn, I., Hammen, V., Hickler, T., Hulme, P.E., Douguet, J.M., Peterson, K., Potts, S., Reginster, I., Maxim, L., Omann, I. and Settele, J. (2010). Biodiversity risk assessment for Europe - putting it all together. In "Atlas of Biodiversity Risk", 252-253. Eds. Josef Settele et al. Pensoft, Sofia & Moscow.

Nagy, L., Dendoncker, N., Butler, A., Reginster, I., Rounsevell, M., Grabherr, G., Gottfried, M. and Pauli, H. (2010). Where have all the flowers gone? From natural vegetation to land use - land cover types: past changes and future forecasts. In "Atlas of Biodiversity Risk", 110-111. Eds. Josef Settele et al.. Pensoft, Sofia & Moscow.

Reginster, I., Rounsevell, M., Butler, A. and Dendoncker, N. (2010). Land use change scenarios for ALARM. In "Atlas of Biodiversity Risk", 100-105. Eds. Josef Settele et al.. Pensoft, Sofia & Moscow.

Spangenberg, J., Fronzek, S., Hammen, V., Hickler, T., Hulme, P.E., Jäger, J., Jylhä, K., Kühn, I., Marion, G., Maxim, L., Monterroso, I., O'Connor, M., Omann, I., Reginster, I., Rodríguez-Labajos, B., Rounsevell, M., Sykes, M. and Vighi, M. (2010). The alarm scenarios: storylines and simulations for assessing biodiversity risks in Europe. In "Atlas of Biodiversity Risk", 10-15. Eds. Josef Settele et al. Pensoft, Sofia & Moscow.

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