Document details for 'Impacts on the metabolome of down-regulating polyphenol oxidase in potato tubers'

Authors Shepherd, L.V.T., Alexander, C.J., Hackett, C.A., McRae, D., Sungurtas, J., Verrall, S.R., Morris, J.A., Hedley, P.E., Rockhold, D., Belknap, W. and Davies, H.V.
Publication details Transgenic Research 24(3), 447-461. Springer Verlag.
Publisher details Springer Verlag
Keywords bruising, genetic modification, metabolomics, potato, PPO, Solanum tuberosum, transgenic
Abstract Tubers of potato (Solanum tuberosum L. cv. Estima) genetically modified (GM) to reduce polyphenol oxidase (PPO) activity and enzymatic discolouration were assessed for changes in the metabolome using Liquid Chromatography-Mass Spectrometry (LCMS) and Gas Chromatography (GC)-MS. Metabolome changes induced over a 48 h period by tuber wounding (sliced transverse sections) were also assessed using two PPO antisense lines (asPPO) and a wild-type (WT) control. Data were analysed using Principal Components Analysis (PCA) and ANalysis Of VAriance (ANOVA) to assess differences between genotypes and temporal changes post-tuber wounding (by slicing). The levels of 15 metabolites (out of a total of 134 that were detected) differed between the WT and asPPO lines in mature tubers at harvest. A considerably higher number (63) of these metabolites changed significantly over a 48 hour period following tuber wounding. For individual metabolites the magnitude of the differences between the WT and asPPO lines at harvest were small compared with the impacts of tuber wounding on metabolite levels. Some of the observed metabolite changes are explicable in terms of pathways known to be affected by wound responses. Whilst some statistically significant interactions (11 metabolites) were observed between line and time after wounding, very few profiles were consistent when comparing the WT with both asPPO lines, and the underlying metabolites appeared to be random in terms of the pathways they occupy. Overall, mechanical damage to tubers has a considerably greater impact on the metabolite profile than any potential unintended effects resulting from the down-regulation of PPO gene expression.
Last updated 2016-05-30
Links
  1. doi link to online article
    http://dx.doi.org/10.1007/s11248-014-9850-8

Unless explicitly stated otherwise, all material is copyright © Biomathematics and Statistics Scotland.

Biomathematics and Statistics Scotland (BioSS) is formally part of The James Hutton Institute (JHI), a registered Scottish charity No. SC041796 and a company limited by guarantee No. SC374831. Registered Office: JHI, Invergowrie, Dundee, DD2 5DA, Scotland